BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB023B02LP1|AL427997
(1100 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1209 2120 0.0
>3x_Contig1209
Length = 5033
Score = 2120 bits (1067), Expect = 0.0
Identities = 1095/1103 (99%), Gaps = 3/1103 (0%)
Strand = Plus / Plus
Query: 1 gatcttcaaaaggaattcaaagaaattgatgaaaagaagcaaagaaacgatggtttaaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2884 gatcttcaaaaggaattcaaagaaattgatgaaaagaagcaaagaaacgatggtttaaaa 2943
Query: 61 cctcatgtaaatgggaacttgttgttagatattgagattgcttktgtgaaattggaaaag 120
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 2944 cctcatgtaaatgggaacttgttgttagatattgagattgctcgtgtgaaattggaaaag 3003
Query: 121 ggggacctagttgaggtcagagacatcctagacgctattgggaaaacacttgatgttcaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3004 ggggacctagttgaggtcagagacatcctagacgctattgggaaaacacttgatgttcaa 3063
Query: 181 gattcggtacctctcagagttaccggtgcctactactcgtgtaacgcttcctattaccaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3064 gattcggtacctctcagagttaccggtgcctactactcgtgtaacgcttcctattaccaa 3123
Query: 241 gtaaagaaagacttcaacaatttctattataccagtcttttatatctctcaacaatcact 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3124 gtaaagaaagacttcaacaatttctattataccagtcttttatatctctcaacaatcact 3183
Query: 301 tcggaagaacaacagcagcgattgacacaactcgaacaacaacaattggcatacaatttg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3184 tcggaagaacaacagcagcgattgacacaactcgaacaacaacaattggcatacaatttg 3243
Query: 361 tgcattgcagcattgttaggtgacaatatctataatttcggtgaactacttcagcatcca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3244 tgcattgcagcattgttaggtgacaatatctataatttcggtgaactacttcagcatcca 3303
Query: 421 attatttcaagtatttcaaacgataaagaatacgaatggttattcagattcttgaacgca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3304 attatttcaagtatttcaaacgataaagaatacgaatggttattcagattcttgaacgca 3363
Query: 481 ttaactgaaggggatttccaaaagtttgatcaaatttcaaaagaaagaattcccaaggta 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3364 ttaactgaaggggatttccaaaagtttgatcaaatttcaaaagaaagaattcccaaggta 3423
Query: 541 ccaatcttagctcaacatgagtcattcttgagacaaaagatttgtttgatgactctagta 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3424 ccaatcttagctcaacatgagtcattcttgagacaaaagatttgtttgatgactctagta 3483
Query: 601 gaaagcgtgtttgcaaagtctatcagaacgttgtctttccgcgatattgcagatgccaca 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3484 gaaagcgtgtttgcaaagtctatcagaacgttgtctttccgcgatattgcagatgccaca 3543
Query: 661 tttttacctatcgacagtgttgaacatttagtaatgagaagtatcagcttaggattgttg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3544 tttttacctatcgacagtgttgaacatttagtaatgagaagtatcagcttaggattgttg 3603
Query: 721 aagggatcaatagatcaagtccaacaattggttacaattacgtgggttcagcctaggatc 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3604 aagggatcaatagatcaagtccaacaattggttacaattacgtgggttcagcctaggatc 3663
Query: 781 atcaaccaagagcaaattaaaaaaatgaaagataacttgataaaatggcaagatgaagtg 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3664 atcaaccaagagcaaattaaaaaaatgaaagataacttgataaaatggcaagatgaagtg 3723
Query: 841 tcgaaattgggtaataagattgaaggaaggggtaaaagtatttgggtataatgcttaagt 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3724 tcgaaattgggtaataagattgaaggaaggggtaaaagtatttgggtataatgcttaagt 3783
Query: 901 atcgtcacatattatatwctacgtacatccgcttaatatctatgaaaaacgaaatccacc 960
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3784 atcgtcacatattatatactacgtacatccgcttaatatctatgaaaaacgaaatccacc 3843
Query: 961 aacatgtttcattgatcggtttgaatttctg-aaragttagacgatatatcttggagttt 1019
||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||
Sbjct: 3844 aacatgtttcattgatcggtttgaatttctgaaagagttagacgatatatcttggagttt 3903
Query: 1020 gt-atatacaggtagatacgtaacacacatagtactcgaatgtagtaa-tatacacatat 1077
|| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 3904 gtaatatacaggtagatacgtaacacacatagtactcgaatgtagtaattatacacatat 3963
Query: 1078 gctattgtatygttcgagagcaa 1100
|||||||||| ||||||||||||
Sbjct: 3964 gctattgtatcgttcgagagcaa 3986
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 10,452
Number of Sequences: 1807
Number of extensions: 10452
Number of successful extensions: 68
Number of sequences better than 1.0e-20: 1
length of query: 1100
length of database: 10,358,551
effective HSP length: 16
effective length of query: 1084
effective length of database: 10,329,639
effective search space: 11197328676
effective search space used: 11197328676
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)